All functions |
|
---|---|
Applies a |
|
Shorthand to create a matrix with |
|
Define consumer resource ODE function |
|
Define an event in which the species and resources are diluted by addition of new medium |
|
Define an event in which a constant amount of some resources is added to (or removed from) the system |
|
Define an event which instantaneously changes resource concentrations using an arbitrary function |
|
Define an event in which the resource populations are multiplied by some factor |
|
Define a schedule of an event occurring at a fixed set of times |
|
Define a schedule of an event occurring repeatedly at a fixed period |
|
Define a schedule of one-off species introductions: one for each species. |
|
Define an event in which a constant amount of some consumers is added to (or removed from) the system |
|
Define an event which instantaneously changes species concentrations using an arbitrary function |
|
Define an event in which the consumer populations are multiplied by some factor |
|
Convert object of class deSolve to a data frame and name columns |
|
Define a functional response using an arbitrary function |
|
Define a Hill functional response |
|
Define a Monod functional response |
|
Define a linear functional response |
|
Define a Holling type 2 functional response |
|
Define a Holling type 3 functional response |
|
Get coefficients from a vector/matrix or |
|
Gets the list of times from a |
|
Get growth rates from a |
|
Get params at an instant in time from a |
|
Get resource supply rates from a |
|
Plot functional responses |
|
Plot consumer and resource dynamics from deSolve output |
|
Create a set of coefficients by linear interpolation |
|
Create a matrix of coefficients using an arbitrary function |
|
Create a vector of coefficients using an arbitrary function |
|
Create a rescomp parameter using an arbitrary function |
|
Create a list of named rescomp parameters |
|
|
Create a rescomp parameter using a sine/square/triangle wave |
Create a resource supply rate using chemostat dynamics |
|
Create a resource supply rate using a constant rate resource supply |
|
Create a resource supply rate using an arbitrary function |
|
Create a resource supply rate using logistic resource growth |
|
Simulate resource competition (a convenience wrapper for |
|
Generate list of parameters for a consumer-resource model to be passed to |